Showing : package installation • reset
14
votes
21
replies
11k
views
Installing ShortRead - error: zlib not found even with zlib in LD_LIBRARY_PATH
package installation shortread dependency
updated 4.9 years ago by ▴ 240 • written 6.0 years ago by ▴ 60
0
votes
13
replies
6.0k
views
Package installation error
parathyroidse package installation dependencies
updated 7.9 years ago by 16k • written 7.9 years ago by • 0
1
vote
12
replies
3.2k
views
Problem in installing bioconductor
package installation
6.8 years ago nosheenfaiz09 • 0
7
votes
11
replies
16k
views
Error: package or namespace load failed for...
package installation flowviz flowcore rcpp flow cytometry
updated 7.0 years ago by 25k • written 7.0 years ago by ▴ 50
2
votes
10
replies
2.2k
views
Trouble Installing lifOver workflow
software error liftOver workflowinstall package installation
updated 7.6 years ago by 65k • written 7.6 years ago by • 0
7
votes
9
replies
3.0k
views
Install ggbio development version
ggbio development package installation
updated 7.6 years ago by 25k • written 7.6 years ago by ▴ 10
2
votes
7
replies
3.3k
views
Bioconductor installing pakage error, R 3.4.2, Ubuntu 17.10
bioconductor biocinstaller package installation
6.5 years ago martyferr90 ▴ 20
0
votes
7
replies
1.3k
views
Installing RnBeads via bioconductor - .onLoad failed in loadNamespace(), call: NULL
package installation .onload
6.4 years ago nicogerstner • 0
0
votes
7
replies
3.0k
views
BiocInstaller wants version of R that is not available yet
bioconductor error biocinstaller package installation install
updated 7.5 years ago by 25k • written 7.5 years ago by • 0
1
vote
7
replies
2.0k
views
Error installing cummeRbund/Rsamtools
cummerbund rsamtools package installation compilation error
8.1 years ago rainer.rutka ▴ 10
4
votes
6
replies
4.4k
views
Cannot Install BSgenome.Hsapiens.UCSC.hg19
software error package installation
7.0 years ago alongalor ▴ 10
0
votes
6
replies
1.7k
views
Illumina Methylation Manifest Install
Install biocinstaller package installation
6.0 years ago julieumn • 0
1
vote
6
replies
1.3k
views
Cannot install flowViz package because dependency flowCore cannot be found, however flowCore has just been installed.
flowViz flowCore package installation
updated 5.7 years ago by 25k • written 5.7 years ago by ▴ 10
3
votes
5
replies
10k
views
Problem Installing limma package
limma software error installation package installation
updated 7.0 years ago by 50k • written 7.0 years ago by • 0
3
votes
5
replies
1.5k
views
Error in installing multiClust package
package installation
8.2 years ago Shamim Sarhadi ▴ 20
0
votes
5
replies
1.4k
views
Problem to install "flowClust"
package installation software error flowclust
7.3 years ago cr • 0
5
votes
5
replies
2.2k
views
Is BiocInstaller::biocLite incompatible with withr::with_makevars?
biocLite package installation withr biocinstaller rhtslib
updated 5.7 years ago by 25k • written 5.7 years ago by ▴ 120
0
votes
5
replies
24k
views
package DESeq2 installation with R.
deseq2 R package installation
updated 2.9 years ago by 42k • written 6.1 years ago by • 0
7
votes
5
replies
16k
views
How to get rid of "Update all/some/none? [a/s/n]:"
rgl mgcv nlme package installation
updated 8.3 years ago by 50k • written 8.3 years ago by ▴ 40
2
votes
5
replies
1.8k
views
[XPS]Installation of xps package in macOS Sierra
xps package installation
updated 7.2 years ago by 25k • written 7.2 years ago by • 0
2
votes
5
replies
958
views
trouble in install DESeq2
deseq2 package installation
6.0 years ago yueli7 ▴ 20
4
votes
5
replies
1.5k
views
Can not install Bioconductor 3.5's GenomicRanges package via biocLite.
package installation
updated 7.0 years ago by 25k • written 7.0 years ago by ▴ 180
0
votes
4
replies
2.2k
views
ChIPQC error: "non-zero exit status"
software error package installation chipqc txdb.hsapiens.ucsc.hg18.knowngene
updated 5.8 years ago by 25k • written 5.8 years ago by • 0
1
vote
4
replies
1.6k
views
Error installing EWCE package
package installation EWCE not available (for r version 3.5.0)
updated 5.6 years ago by ★ 6.5k • written 5.6 years ago by • 0
2
votes
4
replies
1.8k
views
Problem installing Repitools package
package installation r package problem
updated 7.6 years ago by 25k • written 7.6 years ago by ▴ 20
0
votes
4
replies
2.7k
views
Windows 10 openCyto Install: installation path not writeable, unable to update packages: boot, Matrix, mgcv
bioclite openCyto package installation
updated 6.2 years ago by ★ 1.3k • written 6.6 years ago by ▴ 70
2
votes
3
replies
2.4k
views
hgu133plus2hsentrezgcdf or hgu133ahsentrezgcdf packages not installing
readaffy frma affy package installation hgu133a
6.1 years ago Chris Mancuso • 0
3
votes
3
replies
3.3k
views
problem reinstalling Bioconductor package 'clusterProfiler' after updating R to 3.4.0
clusterprofiler package installation r update
updated 7.0 years ago by ▴ 10 • written 7.0 years ago by ▴ 10
2
votes
3
replies
5.3k
views
Error during EBImage installation
ebimage ggtree package installation
updated 6.9 years ago by ▴ 750 • written 6.9 years ago by ▴ 10
1
vote
3
replies
1.9k
views
Bioc 3.3 Windows 10 eiR package fails to install
software error R cheminformatics package installation eiR
updated 8.0 years ago by • 0 • written 8.0 years ago by • 0
0
votes
3
replies
1.3k
views
Prevent biocLite() from asking to update packages every time it's used
bioclite package installation package updates
updated 8.0 years ago by 25k • written 8.0 years ago by ▴ 40
0
votes
3
replies
1.3k
views
Failed to install 'DOSE' package. Win10, 'single candle'
DOSE package installation windows10
6.8 years ago Yisong Zhen ▴ 200
0
votes
3
replies
2.4k
views
Support for devtools::install_version
package installation
5.7 years ago acekane1 • 0
0
votes
3
replies
1.5k
views
flowCore install issues
flowcore package installation compilation error
7.5 years ago zimon.toutoune • 0
0
votes
2
replies
6.2k
views
Unable to install any bioconductor packages
R biocinstaller bioclite package installation
6.7 years ago sebastien200109 • 0
3
votes
2
replies
1.9k
views
Installation of MSA package fails
MSA package installation software error compilation error
updated 6.4 years ago by ▴ 290 • written 6.4 years ago by ▴ 10
1
vote
2
replies
980
views
org.Rn,eg.db not yet available for R version 3.3.3
R package installation
updated 6.8 years ago by ★ 3.0k • written 6.8 years ago by ▴ 10
3
votes
2
replies
2.0k
views
Rsamtools use for R version 3.4.1
rsamtools package installation samtools
updated 6.4 years ago by 65k • written 6.4 years ago by ▴ 60
0
votes
2
replies
1.8k
views
GWASTools depends on the ncdf CRAN package, but this package has been removed
package installation
8.3 years ago jeremy37 • 0
0
votes
2
replies
1.5k
views
pd.hta.2.0 not installed with Bioconductor 3.5 BiocInstaller 1.26.0 R 3.4.1
package installation pd.hta.2.0
6.7 years ago alexander2073 • 0
0
votes
2
replies
2.4k
views
failure to install Homo.sapiens
package installation
8.2 years ago david.cherba • 0
0
votes
2
replies
1.1k
views
Rsubread installation failed
r package installation
5.4 years ago justinkablan225 ▴ 10
0
votes
2
replies
1.1k
views
Installing DEseq packeges under windows10 , can't find library after succesful install
deseq2 package installation
updated 6.3 years ago by 42k • written 6.3 years ago by • 0
0
votes
2
replies
1.6k
views
Rgraphviz installation from source on Linux (Fedora 28) w BioC 3.8 -- failure
package installation compilation error r package problem shared libraries loading error
5.4 years ago Martin Maechler ▴ 330
0
votes
2
replies
8.2k
views
Is there a way to specify where BiocInstaller will install packages similar to the "lib=...." for install.packages?
biocinstaller custom library path installation package installation
updated 5.7 years ago by 65k • written 5.7 years ago by ▴ 20
1
vote
2
replies
1.7k
views
Installation problem, S4Vectors, something about "apply_hotfix73465" not found
package installation s4vectors
updated 6.6 years ago by 25k • written 6.6 years ago by • 0
1
vote
2
replies
1.2k
views
Installation of CountClust fails
package installation CountClust
7.1 years ago Daniel Bottomly ▴ 20
3
votes
2
replies
2.1k
views
Trouble installing bioconductor packages: ERROR: sub-architecture 'R' is not installed
package installation mac os x
updated 6.1 years ago by 25k • written 6.1 years ago by • 0
6
votes
2
replies
1.7k
views
Is there a way to tell biocLite() to install a Bioconductor package only if it is not installed already?
bioclite package installation installation install
updated 6.2 years ago by ★ 6.5k • written 6.2 years ago by ▴ 10
1
vote
2
replies
2.7k
views
Corrupt Database Error When Loading qvalue() Package
qvalue library software error package installation package updates
7.5 years ago tah340 • 0
50 results • Page 1 of 1
Recent ...
Replies
Comment: Cannot connect to ExperimentHub server by Jiayu • 0
Many thanks and it also resolved the same issue for me!
Comment: Help with running egsea() by Chris • 0
I tried egsea.ma and got this error: gsa = egsea.ma(numeric_matrix, vector_group, probe_annotation, contrasts = contrast_matrix, gs.an…
Comment: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call by angelathuynh5 • 0
Thank you for your response. To clarify, the process of making a heatmap performs rowscaling so it takes the value - (mean/std). And to res…
Comment: Method to find pathways different between 2 groups by Gordon Smyth 50k
sigPathway is another method that does not account for inter-gene correlation and which gives inflated significance, as we showed in our 20…
Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu by James W. MacDonald 65k
I doubt you have that many contrasts. I think that is probably the number of rows. What does `dim(fit)` return (and `head(fit$coef)`)?
Votes
Answer: Cannot connect to ExperimentHub server
Answer: confused with tximport counts abundance using salmon input
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu
Answer: Extremely small p-values using Limma for proteomic data
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